This tutorial teaches you how to get to your first test case in DGSWEMDG-SWEM, the experimental discontinous galerkin method counterpart for ADCIRC, on TACC systems.

Obtaining DGSWEM

There is a C version of DGSWEM and a Fortran version. We will focus on DGSWEM-Fortran, which can be obtained from a github repo (it’s private so you have to ask around).

Building DGSWEM

DGSWEM comes with its own makefile.

• make sure you have intel compilers on

• cd into the /work directory and run “make all”. This will automatically compile and link your program based on your runtime environment.

• You should get a adcprep, adcpost, dgswem, and dgswem_serial binary

Building on Frontera

Load the necessary modules:

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This loads the Intel compilers for Fortran and C: ifort and icx, as well as MPI. Then run make all as above.

Building on Vista

On the new machine Vista, we will instead use NVIDIA compilers. Here we can choose between the regular CPU version and a GPU-accelerated version (still in development). First, load the necessary modules by running

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The Fortran compiler is now nvfortran and the C and C++ compilers nvc and nvc++.

CPU version

This is the default version. To compile, run

cd work
make compiler=nvhpc all

GPU version

This code is maintained in a separate branch gpu. Run

git fetch --all
git checkout gpu

to sync this branch. Then compile:

cd work
make all

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Build a test case

Zach from the water institute has graciously lended us a program to build a test case, which we will adapt for DGSWEM:

• python slopingbeach.py 1000 sb1000

• output: sb1000 (mesh file), sb1000.15 (control file), sb1000.info (metadata)

Adapting the Test Case

The control file will have two options that are not valid in DGSWEM currently:

• IM = 511112 Change this to 0.

• NOUTGE = -3 (DGSWEM does not read NETCDF output yet). Change this to 1.

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Running DG-SWEM

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Preparing the

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input files

Apart from the ADCIRC input above, we need a DG-specific control file fort.dg in the same directory that we’re running the program. A sample file can be found in the work directory.

An important option is the rainfall flag, which denotes the following options:

• rainfall = 0 : No rain

• rainfall = 1 - Rain is generated using the R-CLIPER model based on the wind input

• rainfall = 2 - Constant rain is generated on the whole domain

• rainfall = 3 Rain is generated using the IPET model

Serial run

To run on a single CPU, just type

./dgswem_serial

Once done, the output files such as fort.61 and fort.63 will be created in the same directory (if enabled in fort.15).

Parallel run

To run in parallel, we need to first perform domain decomposition. Run

./adcprep 

It will ask for the number of MPI ranks you want to run on, and the names of the input files.

Running the Test Case

Run ./padcirc (it This creates multiple PE**** folders, one per MPI rank.

If running on a local machine, we can proceed to the next step. Otherwise if running on TACC, consult the docs for starting jobs:

• Frontera - https://docs.tacc.utexas.edu/hpc/frontera/#running

• Vista - https://docs.tacc.utexas.edu/hpc/vista/#launching

Run the following:

mpirun -np <N> ./dgswem

where <N> is the number of MPI ranks we configured in the previous step. (Note that DG-SWEM doesn’t have write cores like adcircADCIRC). Afterwards run

./adcpost

to grab and agglomerate the partitioned output files into one file, i.e. the fort.63 in each PE directory into a single fort.63 in the run directory.

GPU run on Vista (experimental)

Here we will run the code on an interactive queue. Start a 60-minute GPU session on a single node with:

idev -p gh -N 1 -m 60

Then run

./dgswem_serial

Note that the MPI-GPU version is still not supported. Additionally, only rainfall = 0 currently works for this GPU version.

For more details on interactive sessions, see https://docs.tacc.utexas.edu/hpc/vista/#launching-interactive

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Congrats! You have just run your first test case of dgswem!

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