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- JupyterHub Server
- Clicking "Logout" in JupyterHub server does not work – it displays a "404 page not found" error.
- Command-line programs
- The bcl2fastq program is not installing correctly so does not work.following programs may not be working currently, but we are working to correct them asap.
- bcl2fastq
- gossamer
- glimmer2
- On the EDU pod, the 3rd party programs used by Josh Beckham's FRI stream (e.g. Gold) are not yet working.
- A few R packages may not be working correctly on some upgraded machines. These may include:
- Seurat
- Signac
- ChIPseeker
- The bcl2fastq program is not installing correctly so does not work.following programs may not be working currently, but we are working to correct them asap.
- Storage server access
- The rssh program that allows direct access to the shared storage server via SSH (e.g. scp, rsync, sftp) is not available in Ubuntu 20.04. We are actively working to implement a suitable replacement. Meanwhile, files can be transferred to/from the storage server through any of a POD's compute server via scp, rsync, sftp.
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