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Doing both of the following may cause unintended effects in the future (particularly if you attempt to update the version of SPAdes you are using) and I do not recommend it. |
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cp $WORK/src/SPAdes-3.13.0-Linux/bin/* $HOME/local/bin #Note that by specifying the full path all the files and the destination, this command can be run from anywhere on TACC. |
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export PATH=$WORK/src/SPAdes-3.13.0-Linux/bin:$PATH
# This line must be added to the .bashrc file found in your $HOME directory, in section 2. I typically add all modifications 1 after the other so the most recent thing i have added is the last line in this section. |
If you have modified your PATH variable, it is a good idea to log out of TACC and log back in before continuing.
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Tutorial assumes that you are on an idev node. If you are not sure please ask for help.
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