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for reasons discussed https://github.com/bioconda/bioconda-recipes/issues/34190 and https://edcarp.github.io/introduction-to-conda-for-data-scientists/03-using-packages-and-channels/index.html listing conda-forge before bioconda is critical. |
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bcftools 1.17
Using htslib 1.17
Copyright (C) 2023 Genome Research Ltd.
License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law. |
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If you get something else, such as an error message with bcftools --version:
do not proceed, check your conda install command and if it matches the one listed above, get my attention. |
Calling variants in reads mapped by bowtie2
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