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Trim all the samples from the multiqc tutorial
As mentioned above, if you have already done the multiqc tutorial, you can use your new fastp command to remove the adapter sequences from all 544 samples or make other changes based on what you saw from the fastqc/multiqc reports.
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- Consider moving back over to the multiqc tutorial use multiqc to determine well the trimming worked.
- The reads could then further be assembled in the Spades tutorial as they are all plasmid samples.
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