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cd $MY_EXPRESS_DIR/src
mkdir build
cd build
cmake -DCMAKE_INSTALL_PREFIX:PATH=$MY_EXPRESS_DIR ..
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cmake doesn't do a good job of building the file "$EXPRESS_DIR/src/build/CMakeFile/express.dir/link.txt" it ignores the links needed for BamTools and Boost, but we can fix that!
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make CXX_FLAGS="-I$TACC_BOOST_INC -I$MY_BAMTOOLS_DIR/include" make install |
This should put a binary executable called "express" in your $MY_EXPRESS_DIR/bin directory.