Software
From GSAF Wiki
Jump to: navigation, searchThe following is a categorized list of software available through the GSAF. Each page lists a summary of the software, the hardware it is currently installed on, links to user documentation, and helpful tips.
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- Getting an account of GSAF's Galaxy instance
- Getting an account on GSAF server-fourierseq
- Tips for working with TACC resources
- References (by organism)
- General purpose tools
- Galaxy Workflows
- Microarray data analysis tools
- NGS Data Quality Control Tools
- Mappers / Aligners
- Gene prediction tools
- SNP discovery
- Splice Junction discovery
- Genome Alignment and Visualization
- De novo assembly
- 454 Analysis tools
- Useful scripts
- Software users group meetings
- Variant calling
- ZOHO Information
- Extracting barcode split data from SOLiD 5500 XSQ files
- R and R packages
References (by organism)
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