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All of the necessary files to complete our analysis have now been generated, but not in the most usable forms. In order to facilitate an easier transfer of the breseq output two small helper scripts have been placed in the $BI/gva_course/mixed_population/helper_scripts folder (export-breseq and batch-run.pl). Copy both files into the breseq_output directory directory and then run the export-breseq script by just typing its name from within the breseq_output directory.
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