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Artifacts from different stages of the analysis will have different archival requirements.
- Original sequence data (fastq files)
- must be backed up!
- Alignments
- usually larger than original fastqs
- should can be backed up once stable
- Peak calling Downstream analysis artifactsDownstream analysis artifacts
- Reporting artifacts (plots, plotting code)
While a project is active you will want to keep more intermediate artifacts for reference. Many of these can be deleted after publication.
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