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convert2annovar.pl -format vcf4 --inlcudeinfoincludeinfo out.vcf > out.vcf.annovar |
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annotate_variation.pl -downdb -buildver hg19 gene hg19_annovar_db/
annotate_variation.pl -downdb -buildver hg19 band hg19_annovar_db/
annotate_variation.pl -downdb -buildver hg19 1000g2010nov hg19_annovar_db/
annotate_variation.pl -downdb -buildver hg19 snp132 hg19_annovar_db/
annotate_variation.pl -downdb -buildver hg19 avsift hg19_annovar_db/
annotate_variation.pl -downdb -buildver hg19 mce46way hg19_annovar_db/
annotate_variation.pl -downdb -webfrom annovar -buildver hg19 ljb_pp2 hg19_annovar_db/
annotate_variation.pl -downdb -webfrom annovar -buildver hg19 ljb_mt hg19_annovar_db/
annotate_variation.pl -downdb -webfrom annovar -buildver hg19 ljb_lrt hg19_annovar_db/
annotate_variation.pl -downdb -webfrom annovar -buildver hg19 ljb_gerp++ hg19_annovar_db/
annotate_variation.pl -downdb -webfrom annovar -buildver hg19 ljb_phylop hg19_annovar_db/
annotate_variation.pl -downdb -webfrom annovar -buildver hg19 ljb_sift hg19_annovar_db/
annotate_variation.pl -downdb -webfrom annovar -buildver hg19 ljb_all hg19_annovar_db/
annotate_variation.pl -downdb -webfrom annovar -buildver hg19 esp5400_all hg19_annovar_db/
annotate_variation.pl -downdb segdup -buildver hg19 hg19_annovar_db/
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