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echo 'source /corral-repl/utexas/BioITeam/bin/profile_ngs_course.bash' >> ~/.profile
source .profile
This will change your PATH to give you access to databases and custom scripts set up by members of the BioITeam at UT. (That's a double >>, not a single >, important!)
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mkdir BWA_Example
cd BWA_Example
cp /work/01863/benni/IntroToTacc/BWA_Example/SRR* .
split -d -l 1000 SRR1580546_1.fastq reads_R1-
split -d -l 1000 SRR1580546_2.fastq reads_R2-
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