Day 1: Introduction to RNA-Seq and Read Mapping
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- Logistics
- The Big Picture
- Part 1: Visualization using CummeRbund
- Part 2: Visualization using Integrated Genome Viewer (IGV)
- Part 3: Go Enrichment analysis using goseq
- Part 4: Clustering using WGCNA
- Day 4 take aways
- Resources
- Part 5: Exercise time!
Many thanks to Dr. Scott Hunicke-Smith, Dr. Jeff Barrick, Anna Battenhouse and Benni Goetz from whom some slides and wiki pages have been borrowed!