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- Introduction to TACC
- Linux basics with Lonestar
- Logging in via SSH
- Command-line tricks (tab completion and the history)
- Essential Linux commands
- Wildcards and special file names
- Using options with Linux commands
- Getting help
- Extra: Printable cheat sheet of common Linux commands
- Lonestar Essentials
- The login (or head) nodes
- Acceptable uses for login nodes
- What not to use login nodes for
- Lonestar file systems
- Methods for running computing jobs Running compute jobs on Lonestar
- Batch (qsub)
- Interactive Running a job on Lonestar(idev)
- The login (or head) nodes
- Editing files
- Using nano on the command line
- Demo: Using TextWrangler (Mac), Notepad++ (Windows), or gEdit (Linux) from a desktop environment
- Finding and using software
- The module system
- avail, list, load, swap, unload, key
- Linux PATHs
- Extra: List of genomics modules available at TACC
- Extra: Installing your own Linux software
- The module system
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