Title: Genome Variant Analysis Course 2017  
Owner: Deatherage, Daniel E
Creator: Deatherage, Daniel E Apr 13, 2017
Last Changed by: Deatherage, Daniel E May 25, 2017
Tiny Link: (useful for email) https://cloud.wikis.utexas.edu/wiki/x/1BHYAg
Export As: Word · PDF  
Bioinformatics Team (BioITeam) at the University of Texas (17)
    Page: Advanced breseq GVA2017
    Page: Annovar Annotations -- GVA2017
    Page: Bedtools tutorial -- GVA2017
    Page: Evaluating and processing raw sequencing data GVA2017
    Page: Exome Capture Metrics GVA2017
    Page: Genome Analysis Toolkit (GATK) 2017
    Page: Genome Assembly (velvet) -- GVA2017
    Page: Human Trios -- GVA2017
    Page: IGV Tutorial -- GVA2017
    Page: Linux and Lonestar 5 Setup
    Page: Lonestar5 Breseq Tutorial 2017
    Page: Molecular Index Error correction GVA2017
    Page: Read Mapping with bowtie2 Tutorial 2017
    Page: Single Nucleotide Variant (SNV) calling Tutorial GVA2017
    Page: SSCS vs Trimmed Read Variant calls GVA2017
    Page: Structural Variant (SV) calling with SVdetect 2017
    Page: Using TACC's Job Submission System (and 2017 end of class review)
Core NGS Tools (4)
    Page: 2020 Core NGS Resources
    Page: 2021 Core NGS Resources
    Page: 2022 Core NGS Resources
    Page: Core NGS Resources
Hierarchy
Children (17)
    Page: Advanced breseq GVA2017
    Page: Annovar Annotations -- GVA2017
    Page: Bedtools tutorial -- GVA2017
    Page: Evaluating and processing raw sequencing data GVA2017
    Page: Exome Capture Metrics GVA2017
    Page: Genome Analysis Toolkit (GATK) 2017
    Page: Genome Assembly (velvet) -- GVA2017
    Page: Human Trios -- GVA2017
    Page: IGV Tutorial -- GVA2017
    Page: Linux and Lonestar 5 Setup
Labels
There are no labels assigned to this page.
Time Editor  
May 25, 2017 08:20 Deatherage, Daniel E View Changes
May 25, 2017 07:03 Deatherage, Daniel E View Changes
May 25, 2017 06:06 Deatherage, Daniel E View Changes
May 24, 2017 07:52 Deatherage, Daniel E View Changes
May 24, 2017 07:33 Deatherage, Daniel E  
Outgoing Links
External Links (4)
    barricklab.org/
    https://utexas.atlassian.net/wiki/display/GSAF/About+Us#Sco…
    www.utexas.edu/maps/main/buildings/mez.html
    https://www.tacc.utexas.edu/
Bioinformatics Team (BioITeam) at the University of Texas (18)     Page: Human Trios -- GVA2017
    Page: SSCS vs Trimmed Read Variant calls GVA2017
    Page: Annovar Annotations -- GVA2017
    Page: Linux and Lonestar 5 Setup
    Page: Structural Variant (SV) calling with SVdetect 2017
    Page: Genome Assembly (velvet) -- GVA2017
    Page: Molecular Index Error correction GVA2017
    Page: Advanced breseq GVA2017
    Page: Genome Analysis Toolkit (GATK) 2017
    Page: Exome Capture Metrics GVA2017
    Page: Evaluating and processing raw sequencing data GVA2017
    Page: Read Mapping with bowtie2 Tutorial 2017
    Page: Single Nucleotide Variant (SNV) calling Tutorial GVA2017
    Page: Using TACC's Job Submission System (and 2017 end of class review)
    Page: Bedtools tutorial -- GVA2017
    Page: IGV Tutorial -- GVA2017
    Page: Lonestar5 Breseq Tutorial 2017
    Page: Genome Variant Analysis Course 2017