Title: Single Nucleotide Variant (SNV) calling Tutorial GVA2023  
Owner: Deatherage, Daniel E
Creator: Deatherage, Daniel E Jun 17, 2023
Last Changed by: Deatherage, Daniel E Jun 20, 2023
Tiny Link: (useful for email) https://cloud.wikis.utexas.edu/wiki/x/30bYAg
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Bioinformatics Team (BioITeam) at the University of Texas (7)
    Page: Advanced breseq GVA2023
    Page: Genome Analysis Toolkit (GATK) . -- GVA2023
    Page: Genome Variant Analysis Course 2023
    Page: Human Trios -- GVA2023
    Page: IGV Tutorial -- GVA2023
    Page: Molecular Index Error correction GVA2023
    Page: Stampede2 Breseq Tutorial GVA2023
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Time Editor  
Jun 20, 2023 11:26 Deatherage, Daniel E View Changes
Jun 20, 2023 11:25 Deatherage, Daniel E View Changes
Jun 20, 2023 10:03 Deatherage, Daniel E View Changes
Jun 18, 2023 00:14 Deatherage, Daniel E View Changes
Jun 17, 2023 23:57 Deatherage, Daniel E  
Outgoing Links
External Links (9)
    https://docs.gdc.cancer.gov/Data/File_Formats/VCF_Format/
    https://edcarp.github.io/introduction-to-conda-for-data-sci…
    https://anaconda.org/bioconda/bcftools
    https://github.com/bioconda/bioconda-recipes/issues/13958
    libgsl.so
    en.wikipedia.org/wiki/Allele_frequency
    https://github.com/bioconda/bioconda-recipes/issues/34190
    https://anaconda.org/bioconda/samtools
    https://github.com/bioconda/bioconda-recipes/issues/12100
Bioinformatics Team (BioITeam) at the University of Texas (4)     Page: Genome Variant Analysis Course 2023
    Page: Read Mapping with bowtie2 Tutorial GVA2023
    Page: Evaluating and processing raw sequencing data GVA2023
    Page: Launching an iDev session GVA2023