Title: Stampede2 Breseq Tutorial GVA2023  
Owner: Deatherage, Daniel E
Creator: Deatherage, Daniel E Jun 18, 2023
Last Changed by: Deatherage, Daniel E Jun 21, 2023
Tiny Link: (useful for email) https://cloud.wikis.utexas.edu/wiki/x/hkfYAg
Export As: Word · PDF  
Bioinformatics Team (BioITeam) at the University of Texas (5)
    Page: Advanced breseq GVA2023
    Page: fastp - GVA2023
    Page: Genome Assembly (SPAdes) -- GVA2023
    Page: Genome Variant Analysis Course 2023
    Page: MultiQC - fastQC summary tool -- GVA2023
Labels
There are no labels assigned to this page.
Time Editor  
Jun 21, 2023 18:00 Deatherage, Daniel E View Changes
Jun 20, 2023 23:08 Deatherage, Daniel E View Changes
Jun 20, 2023 23:05 Deatherage, Daniel E View Changes
Jun 18, 2023 19:58 Deatherage, Daniel E  
Outgoing Links
External Links (10)
    www.ncbi.nlm.nih.gov/nuccore/NC_012967.1
    https://anaconda.org/bioconda/breseq
    www.ebi.ac.uk/ena/data/view/SRR030257&display=html
    www.ncbi.nlm.nih.gov/pubmed/19838166
    https://anaconda.org/
    www.ncbi.nlm.nih.gov/sites/entrez?Db=pubmed&Cmd=ShowDetailV…
    https://anaconda.org/tiagodrm
    barricklab.org/
    barricklab.org/twiki/pub/Lab/ToolsBacterialGenomeResequenci…
    www.ncbi.nlm.nih.gov/sra
Bioinformatics Team (BioITeam) at the University of Texas (8)     Page: Advanced variant calling tutorial (GVA14)
    Page: Single Nucleotide Variant (SNV) calling Tutorial GVA2023
    Page: Launching an iDev session GVA2023
    Page: Identifying mutations in microbial genomes (breseq)
    Page: Read Mapping with bowtie2 Tutorial GVA2023
    Page: Linux and stampede2 Setup -- GVA2023
    Page: Genome Variant Analysis Course 2023
    Page: Copying files from TACC to your personal computer.