GS Amplicon variant analyzer

Current Version 2.5.3. Full documentation from Roche.

Input options

• Reference sequences
• Amplicon information
• Samples
• Read data

Associations need to be made between all the input information.

Output options

• Sample/variant information, including frequencies.
• Ace files
• Flowgrams - on GUI only
• Histograms indicating variant positions.

Running GS Amplicon variant analyzer

GUI tool:

• Can be accessed by typing gsAmplicon

Commandline tool:

• doAmplicon <files>